Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876660.1_cds_XP_016436213.1_32095
CDS Infomation

[gene=LOC107762367] [db_xref=GeneID:107762367] [protein=BTB/POZ domain-containing protein NPY4-like isoform X2] [protein_id=XP_016436213.1] [location=complement(join(75895..76470,76895..78070,78191..78232))] [gbkey=CDS]
Sequence

ATGGTTATCAATGTTGGAGATGTGAAGTTTTACCTCCACAAGTTCCCCCTTCTGTCGAAG
AGTTATCGCTTGCAGAAGCTGGTTGCCTGTACAAATGAGGAAAACGGCGATGAAATCAAC
ATCCATGATATACCTGGTGGACCTGCTGCTTTTGATGTATGCGCAAAGTTCTGTTATGGT
ATGACAGTAACTTTGAATGCATATAACGTCGTTGCAGCTCGTTGTGCAGCAGAGTACTTG
GAAATGTACGAGACAGTTGAGAAAGGAAATCTTATCTACAAGATTGAAGTTTTTCTTACA
TCTAGCATCTTCAGAAGCTGGAAAGACTCTATCATTGTTCTTCAGACCACAAAAGGTTTT
TTTCCCTGGTGCGAGGAACTAAAGATCGTTAGTCATTGCCTGGATTCCGTGGCATCTAAA
GCTTCCACAGACACCTCAAAGGTGGACTGGTCTTATACTTATAACCATAAAAAGCTTCTA
TCTGAAAATGAAATTGATCTGCACTGCGACGTAGTGAACAAGCAACAGCTTGTTCCAGAA
GACTGGTGGGTTGAGGACCTTTGCGAGCTTCATATTGACTTGTATAAACGGGTCATAACA
ACCATAAAAACAAAAGGAAGGATGTCTGCAGAAGCAATAGGTGAAGCATTGAAAGCATAT
GTCAACCGAAGGCTACTTGGATTCAGCAAGGGTAAGATACATGGAAGTGATCCTGAAAAG
TATCGGTATCTGGTTGATACGATTACTTGGTTGTTGCCCAAAGAGAAAAATGGTGTTTCG
TGTGGTTTCTTGATCCGATTGCTGCAAGCATCTATTGCATTGGAATGTGGACAAACAGTC
AGAAGTGAACTGAAGAAGAGGGTCGGGCTGCAGCTGGAAGAGGCGACAGTAGGTGACCTT
CTAATTCGAGCTCCAGATAGTGAAACTATTATGTTCGATATTGACCTAGTACACGACCTC
ATAGAGCAGTTCATGCTCCATCAAAAGAATGGTCAGATTGATTGTCCAGCAGATAATAGA
TTCCAGGATATACGGCCTGCATTTGCATCAGAACGTTCCAAGGTTAAGGTGGCTAGGATA
ATTGATGGATACCTTGCTGAAGTTGCTAGAGATCCAAACCTACCTCTATCGAAATTTGTC
AATCTTGCAGAGTTGGTATCTGGTTTCTCCAGATCATCCCATGATGGAATTTACCGTGCT
ATCGACATGTATCTTAAGGAACATCCCGGGATTACCAAAAGCGAGAGAAAAAGAATTTGC
AGGCTGATGGACTGCAGGAAGCTATCAGCTGAGGCCTGCATGCATGCTGTGCAGAACGAG
CGCCTTCCTTTGCGTATAGTTGTACAAGTTCTATTCTTTGAGCAAGTAAGAGCCACAACA
TCATCCGGCGGTGGCAGCACTCCCGACCTAACTAGATCAGTTAAGGCTTTGCTCCCGGTG
GGATCTTACGGGAGCTCCACGTCTGTTACATCCAACACCGAGGAAGATTGGGATGCTGTG
CCCACAGCAAAGGAACTTAAAGCTCTGAAAGGTGGGCTTGCTACTCTAAGATTGAGAGAC
AGGGAAGGTAACAATGGTAGTGACTTGAACGACATGAAAACAAATGCGGAAAAAGTTGAT
ACTAGCAAAGTGAAGGGTTCAATCATATCGAAAAAAATGTTCTCAAAACTGTGGTCAAAT
AAAGATAGACTAAGTGAGAATAGCAGCTCGGATACATCAGAAAGCCCATCATCTTCAAAT
GCAGGGGAAACAAAGTCTACCCCATGTAGAAGTAGGAGGCAATCTATGTCTTAG

Peptide Sequence

PEP ID

XP_016436213.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein NPY4-like isoform X2 [Nicotiana tabacum]
Sequence

MVINVGDVKFYLHKFPLLSKSYRLQKLVACTNEENGDEINIHDIPGGPAAFDVCAKFCYG
MTVTLNAYNVVAARCAAEYLEMYETVEKGNLIYKIEVFLTSSIFRSWKDSIIVLQTTKGF
FPWCEELKIVSHCLDSVASKASTDTSKVDWSYTYNHKKLLSENEIDLHCDVVNKQQLVPE
DWWVEDLCELHIDLYKRVITTIKTKGRMSAEAIGEALKAYVNRRLLGFSKGKIHGSDPEK
YRYLVDTITWLLPKEKNGVSCGFLIRLLQASIALECGQTVRSELKKRVGLQLEEATVGDL
LIRAPDSETIMFDIDLVHDLIEQFMLHQKNGQIDCPADNRFQDIRPAFASERSKVKVARI
IDGYLAEVARDPNLPLSKFVNLAELVSGFSRSSHDGIYRAIDMYLKEHPGITKSERKRIC
RLMDCRKLSAEACMHAVQNERLPLRIVVQVLFFEQVRATTSSGGGSTPDLTRSVKALLPV
GSYGSSTSVTSNTEEDWDAVPTAKELKALKGGLATLRLRDREGNNGSDLNDMKTNAEKVD
TSKVKGSIISKKMFSKLWSNKDRLSENSSSDTSESPSSSNAGETKSTPCRSRRQSMS

Transcript Sequence

Gene sequence data has not been registered.